BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C12SP1|AL428884
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig676 1602 0.0
>3x_Contig676
Length = 2200
Score = 1602 bits (807), Expect = 0.0
Identities = 816/819 (99%), Gaps = 1/819 (0%)
Strand = Plus / Plus
Query: 72 gtttacattttctaatagccagctacctattgaggggtcaccatcgttgggtggtaccaa 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtttacattttctaatagccagctacctattgaggggtcaccatcgttgggtggtaccaa 67
Query: 132 atccgatctgtttggaggactaagtgcgaacgcgaagaacgatgatgcatcaggtacgat 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atccgatctgtttggaggactaagtgcgaacgcgaagaacgatgatgcatcaggtacgat 127
Query: 192 tatgccgaagatgcctgatcaggaggcgaaaaaggctttggggcgggcttcatggaaata 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tatgccgaagatgcctgatcaggaggcgaaaaaggctttggggcgggcttcatggaaata 187
Query: 252 tttccacactcttttagccagatttcccgacgagcctacagagcaagagaaaacgaaact 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttccacactcttttagccagatttcccgacgagcctacagagcaagagaaaacgaaact 247
Query: 312 acgtgaatttctttacctatatgcggagttatatccatgtggcgaatgttcttaccattt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acgtgaatttctttacctatatgcggagttatatccatgtggcgaatgttcttaccattt 307
Query: 372 cgtcaagatgttgaagaaatacccaccacaagtagccagtagaaccactgctgcyttatg 431
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 308 cgtcaagatgttgaagaaatacccaccacaagtagccagtagaaccactgctgctttatg 367
Query: 432 gggctgtcatattcataatctagtgaacgatcatcttgaaaaaccaaggtacgattgtaa 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gggctgtcatattcataatctagtgaacgatcatcttgaaaaaccaaggtacgattgtaa 427
Query: 492 cacaatcttagaagattacgactgtggatgcactgacgagaacggtaatatcgatccatc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cacaatcttagaagattacgactgtggatgcactgacgagaacggtaatatcgatccatc 487
Query: 552 tttgaaaatgaacaaagtaacgttgaacaaagaggagaaacaattgggatgaagtgaggg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tttgaaaatgaacaaagtaacgttgaacaaagaggagaaacaattgggatgaagtgaggg 547
Query: 612 aatcgtttaccctccgtatgtgtcaattgaaagaataagatctaatattgttgcattcgc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aatcgtttaccctccgtatgtgtcaattgaaagaataagatctaatattgttgcattcgc 607
Query: 672 atttcgttttatctaaatatatatgtaactaataagcatagagagtatacggcagcmata 731
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 608 atttcgttttatctaaatatatatgtaactaataagcatagagagtatacggcagcaata 667
Query: 732 tttttatcatcacattatggtacaacaggcactcgtttcctcgtgagatctagcaaaatt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tttttatcatcacattatggtacaacaggcactcgtttcctcgtgagatctagcaaaatt 727
Query: 792 gttcttcctcatagtattattatatgggttttcaccaaccattgggtaa-cccatacttc 850
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 728 gttcttcctcatagtattattatatgggttttcaccaaccattgggtaaccccatacttc 787
Query: 851 tggaacagcgtaatccttatgggttgaggtatagtcgat 889
|||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tggaacagcgtaatccttatgggttgaggtatagtcgat 826
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6337
Number of Sequences: 1807
Number of extensions: 6337
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)